rs72765806 chr9:132241600 C>T
- Sequence
tccaggcgcgtggaacagcacgtg[C/T]acagctctggagactgcaggcgcg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BHE40_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 2.11 | -1.93 | 1.00 | -2.14 | Concordant | |||
| CTCF_HUMAN | -0.05 | 0.98 | 1.00 | n/a | No Hit |
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Motif analysis
