rs72769843 chr5:64196103 T>C
- Sequence
aactgatattgaataaaacaatgt[T/C]attcaagggcctgttgtatttcta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 2.38 | n/a | 2.00 | 3.57 | Discordant | |||
| IKZF2_HUMAN | 2.71 | -2.78 | 1.00 | n/a | n/a |
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Motif analysis
