rs72774130 chr10:5846374 T>C

Sequence
cgggttgctttgtgtgctggaaaa[T/C]gtgagtcagaccccggaggggaaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
IKZF1_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 1.94 -2.29 9.9·10-41.00 1.50 n/a n/a
TF65_HUMAN 1.42 n/a 0.011.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg

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