rs72774380 chr10:15084693 A>C
- Sequence
ctgcaatcagaggctgaagttaca[A/C]agttacacttctatgcaaataaag
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.98 | -5.49 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.23 | 0.71 | 1.25 | n/a | No Hit | |||
| ANDR_HUMAN | 2.85 | 0.37 | 1.30 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pituitary, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid