rs72780753 chr10:17585339 C>T

Sequence
aatctgctgattctgggggctgcc[C/T]gattcacgaatcgttgattgctca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages)
ASB for transcription factors
IKZF2_HUMAN NFAC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -1.26 2.70 1.003.8·10-4 1.00 n/a n/a
NFAC3_HUMAN -2.66 2.57 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

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