rs72781731 chr2:6945262 G>T
- Sequence
cctcctggtttcagagttcctaat[G/T]tgtagaaatgagcagtatttttag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NR2C1_HUMAN MEF2B_HUMAN EP300_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | -1.64 | 1.89 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | -0.81 | 0.81 | 1.00 | 1.16 | Weak Concordant | |||
| EP300_HUMAN | -0.38 | 2.26 | 1.17 | n/a | n/a | |||
| TBX21_HUMAN | -1.44 | 1.75 | 1.00 | n/a | No Hit |
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Motif analysis
