rs72786701 chr2:10169312 C>T
- Sequence
gtaagttcccaagttgaagcaccc[C/T]cttcaggtgtagttttagacgtgc
- ASB in cell types
- MS-1 (Small cell lung carcinoma) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.13 | 0.71 | 1.32 | -0.84 | Weak Concordant |
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Motif analysis
