rs72787721 chr2:30266545 C>T
- Sequence
tacagctggggtcatgctgcctgg[C/T]gccatgctgtgccttgatttcctg
- ASB in cell types
- BEAS-2B (bronchial epithelium) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- GCR_HUMAN ERG_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.63 | -0.09 | 1.00 | n/a | No Hit | |||
| ERG_HUMAN | n/a | 3.26 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Transverse, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood