rs72788833 chr2:43131681 C>T
- Sequence
ctgaggggatggtcccttcccacc[C/T]ttaagggcaccatggactgttgtc
- ASB in cell types
- 22RV1 (prostate carcinoma) CD14+ monocytes naive IgD+ B cells GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN FOXP1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.68 | 0.54 | 2.00 | 0.21 | Weak Discordant | |||
| STAT1_HUMAN | 1.87 | n/a | 3.00 | n/a | No Hit | |||
| FOXP1_HUMAN | 2.20 | -4.66 | 2.00 | n/a | No Hit |
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Motif analysis
