rs72789210 chr16:69057920 C>T
- Sequence
agcacagtccaaccacagactacg[C/T]gattcagcaacttcccacaatgta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZN687_HUMAN IKZF2_HUMAN IKZF1_HUMAN BACH1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN687_HUMAN | -2.54 | 2.87 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -1.62 | 2.14 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | -2.69 | 2.27 | 1.25 | n/a | n/a | |||
| BACH1_HUMAN | -0.18 | 2.79 | 1.50 | 5.02 | Concordant | |||
| ZN592_HUMAN | -2.84 | 2.74 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Spleen