rs72795882 chr5:130542065 T>C
- Sequence
taacttctaggtgcatgagtcatg[T/C]ggtttgccacatctgcaggctggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF7_HUMAN IKZF2_HUMAN MEF2B_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | -3.46 | 3.86 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -3.07 | 3.36 | 1.00 | n/a | n/a | |||
| MEF2B_HUMAN | n/a | 3.46 | 1.00 | n/a | No Hit | |||
| REQU_HUMAN | -2.84 | 3.15 | 1.00 | n/a | n/a | |||
| EP300_HUMAN | -2.83 | 3.08 | 1.00 | n/a | n/a |
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Motif analysis
