rs72796420 chr16:27155262 G>A
- Sequence
ccacccattaacgcactgggccgc[G/A]gtttgtggtggtggtacacaaagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes primary B-CLL cells epidermal keratinocytes
- ASB for transcription factors
- STAT1_HUMAN IKZF2_HUMAN BRD4_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.37 | -0.56 | 1.50 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.83 | -1.52 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | 2.67 | n/a | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.86 | -0.85 | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.27 | n/a | 1.00 | n/a | No Hit |
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