rs72801918 chr10:57703962 A>G
- Sequence
agtcagtactcacaatgctttcac[A/G]acaggctcacagcagataaaaata
- ASB in cell types
- HS-ES-2M (Epithelioid sarcoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SMRC1_HUMAN SMCA4_HUMAN CEBPB_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | 2.96 | -3.10 | 1.00 | n/a | n/a | |||
| SMCA4_HUMAN | 2.77 | -2.44 | 1.00 | n/a | n/a | |||
| CEBPB_HUMAN | 1.36 | -0.62 | 1.43 | -3.44 | Concordant | |||
| FOXA1_HUMAN | 0.94 | -0.15 | 1.74 | n/a | No Hit |
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Motif analysis
