rs72803998 chr5:150258471 G>A

Sequence
atggcacagctgctaaaataatgc[G/A]gcagttatgtatctactggttcag
ASB in cell types
GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -2.22 2.19 1.000.03 1.00 n/a n/a
CTCF_HUMAN -1.17 2.06 1.000.03 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Nerve_Tibial

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