rs72806562 chr2:46987338 T>C
- Sequence
atgggggaggctccagaaatgagc[T/C]tggttctcttttgcatgaaacagc
- ASB in cell types
- adult erythroblasts GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) epidermal keratinocytes
- ASB for transcription factors
- KDM6A_HUMAN ANDR_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM6A_HUMAN | 2.10 | n/a | 3.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.84 | n/a | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | 0.75 | 0.60 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3