rs72807641 chr2:25018996 C>G

Sequence
tctacacattcagtagaaaccatt[C/G]tttgaattttgatcttttcctctg
ASB for transcription factors
SOX13_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SOX13_HUMAN n/a 3.22 1.003.7·10-3 2.00 4.41 Concordant
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Motif analysis

SOX13_HUMAN Concordant
SOX13_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Brain_Anterior_cingulate_cortex_BA24,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Testis,  Whole_Blood

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