rs72808177 chr10:72364449 T>G
- Sequence
aatgagcccttgcacggagccttc[T/G]tgccagcaggtggcacttgaagcc
- ASB in cell types
- A549 (lung carcinoma) kidney epidermal keratinocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.30 | 0.56 | 1.43 | -2.39 | Concordant |
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Motif analysis
