rs72817714 chr17:31533821 G>A
- Sequence
aggggcgccatgggaacaggctcc[G/A]gagggagccggcgtctgaaaggcc
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) EOL-1 (Acute myeloid leukemia) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.60 | 1.07 | 1.34 | 3.01 | Concordant | |||
| STAG1_HUMAN | -0.29 | 1.37 | 1.17 | n/a | n/a |
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Motif analysis
