rs72818577 chr16:88077575 G>A

Sequence
cagctccagaaggcacagtcctgg[G/A]gtccttagagaaagttgcagccac
ASB in cell types
LHSAR (prostate epithelial cells) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.64 1.31 1.003.6·10-4 1.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Nerve_Tibial,  Pituitary,  Prostate,  Stomach,  Testis,  Thyroid

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