rs72818718 chr17:10614768 G>C
- Sequence
tggtcatttccatcaactgcacct[G/C]ggtttaaaaggactggtgtgggag
- ASB in cell types
- AG04450 (fibroblasts) HeLa S3 (cervical adenocarcinoma) HeLa Kyoto (cervical adenocarcinoma) WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.26 | 0.51 | 1.40 | n/a | No Hit | |||
| SMC3_HUMAN | 1.28 | -0.66 | 1.88 | n/a | n/a | |||
| RAD21_HUMAN | 1.10 | 0.32 | 1.67 | n/a | n/a |
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