rs72819020 chr10:93437852 C>A
- Sequence
tgtcaagctcctgccctgatcccc[C/A]gccaaaaggcaggagagccaagga
- ASB in cell types
- breast tumor hNSC (neural stem cells)
- ASB for transcription factors
- ESR1_HUMAN CHD8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.98 | -0.53 | 2.00 | n/a | No Hit | |||
| CHD8_HUMAN | -0.68 | 1.99 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Prostate, Testis, Thyroid, Whole_Blood