rs72819345 chr2:61764621 C>T
- Sequence
gttcggatcagctgccggccgttc[C/T]cggcgtagcctagggcggggaggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) CD14+ monocytes A549 (lung carcinoma)
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN CHD8_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.30 | n/a | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 2.61 | 0.35 | 1.50 | n/a | No Hit | |||
| CHD8_HUMAN | 2.10 | -2.06 | 1.00 | n/a | n/a | |||
| TIF1B_HUMAN | 2.58 | -1.59 | 2.00 | n/a | n/a | |||
| IKZF2_HUMAN | 2.67 | 0.28 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 6