rs72835066 chr17:4909048 A>C
- Sequence
acacacagacacaggcatggaccc[A/C]cacacacacacagacacacacaca
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- ZSCA4_HUMAN ZIC2_HUMAN SALL1_HUMAN ZN148_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZSCA4_HUMAN | n/a | 2.11 | 1.50 | -2.55 | Discordant | |||
| ZIC2_HUMAN | n/a | 3.16 | 1.50 | n/a | No Hit | |||
| SALL1_HUMAN | n/a | 3.52 | 1.00 | 1.53 | Weak Concordant | |||
| ZN148_HUMAN | -3.68 | 3.57 | 1.00 | 1.53 | Weak Concordant | |||
| ZBT17_HUMAN | n/a | 3.31 | 2.00 | 3.13 | Concordant |
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Motif analysis
