rs72959667 chr2:219571982 T>A
- Sequence
tctgtgtgtgtgtgtgtgagagag[T/A]gtgtgtgtgtgagaatttgtgtgt
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) HKC8 (kidney proximal tubule cell line)
- ASB for transcription factors
- ZSCA4_HUMAN ZN366_HUMAN ZN335_HUMAN Z280D_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZSCA4_HUMAN | 0.80 | n/a | 1.50 | -0.95 | Weak Concordant | |||
| ZN366_HUMAN | 1.47 | -1.47 | 1.00 | n/a | n/a | |||
| ZN335_HUMAN | 1.35 | -1.35 | 1.00 | n/a | No Hit | |||
| Z280D_HUMAN | 2.65 | -2.34 | 1.00 | n/a | n/a | |||
| ZN639_HUMAN | 2.14 | -1.84 | 1.00 | n/a | n/a |
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Motif analysis
