rs7296714 chr12:27244075 G>C
- Sequence
ggagatgggtggggccgggaagac[G/C]ggcgttgacgacagaaggctactt
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) monocytes from periferal blood breast tumor
- ASB for transcription factors
- SRBP2_HUMAN ZN629_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | -4.09 | 2.13 | 2.50 | n/a | No Hit | |||
| ZN629_HUMAN | 0.51 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid