rs7297174 chr12:23950646 C>T
- Sequence
ggggaggtcaggagtaggaagcgc[C/T]cccctggctgtggatctctttaat
- ASB for transcription factors
- GLIS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | 3.24 | n/a | 2.00 | -2.38 | Concordant |
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Motif analysis
Genetic associations
GRASP cystatin c in serum, hdl cholesterol, height, ldl cholesterol, rheumatoid arthritis, total cholesterol