rs7297198 chr12:51901655 C>T
- Sequence
atgaggcactcctactccctccag[C/T]ggaactcccacccccacatgccag
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) K562 (myelogenous leukemia) HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- SPI1_HUMAN ETS1_HUMAN FLI1_HUMAN EGR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.72 | 0.42 | 1.00 | -2.01 | Concordant | |||
| ETS1_HUMAN | 2.86 | -0.90 | 1.00 | -3.94 | Concordant | |||
| FLI1_HUMAN | 2.89 | -2.78 | 1.00 | n/a | No Hit | |||
| EGR1_HUMAN | 1.84 | 0.05 | 1.75 | n/a | No Hit | |||
| KDM1A_HUMAN | 1.61 | -4.26 | 2.00 | n/a | n/a |
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Motif analysis
