rs7297431 chr12:19447298 T>C

Sequence
aagtcttacgttgaacaggctggt[T/C]ccttgttagacatattgtcagcat
ASB in cell types
SMMC-7721 (hepatocellular carcinoma) CHL-1 (Melanoma)
ASB for transcription factors
BRD4_HUMAN PBX3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 1.36 -0.45 0.011.00 3.00 n/a n/a
PBX3_HUMAN -2.66 2.57 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP bipolar disorder in alcoholics bipolar disorder in non-alcoholics body mass index (bmi) hdl cholesterol hypertension (early onset hypertension) infant head circumference prop taste detection threshold
GTEx eQTL Artery_Aorta

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