rs7297853 chr12:3641880 T>C
- Sequence
gtcctcagatccatgcctatttgc[T/C]ccgatgtttgaacagaaaagggct
- ASB in cell types
- breast tumor xenograft
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.29 | -0.01 | 1.33 | -1.17 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, homa-b, irritible bowel syndrome