rs7300076 chr12:26109493 C>T

Sequence
caggtagtttcaatgcatcaccaa[C/T]ggcacaagtggaagccttggcttt
ASB in cell types
HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
RBM25_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 1.34 -1.98 2.4·10-41.00 1.50 n/a n/a
ANDR_HUMAN 1.92 -0.68 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  homa-b,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Lung,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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