rs7300422 chr12:108635557 G>A

Sequence
ttgtgcagcttgtgagctaagaat[G/A]gtggttacatttttaagtggttgg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
ASB for transcription factors
MEF2B_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN 0.33 1.39 1.000.02 1.50 n/a No Hit
BRD4_HUMAN 1.55 0.19 0.051.00 1.32 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI lung function (fev1/fvc)
GTEx eQTL Adrenal_Gland Brain_Cerebellum Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Esophagus_Muscularis Liver Pancreas Whole_Blood

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