rs7300806 chr12:68209399 A>G

Sequence
aagcacatgatttacagctgtgac[A/G]gtttagcatatgctctgctacttg
ASB in cell types
iPS-derived chondrocytes SMMC-7721 (hepatocellular carcinoma)
ASB for transcription factors
RARA_HUMAN PBX3_HUMAN ZBT20_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN 1.26 0.55 1.2·10-31.00 1.00 n/a No Hit
PBX3_HUMAN 2.76 -4.99 0.021.00 2.00 n/a No Hit
ZBT20_HUMAN -1.55 2.61 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal Nerve_Tibial Thyroid

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