rs7301270 chr12:92501394 C>T
- Sequence
gaatgagagtaattcctccaggaa[C/T]gagtcattagggtttggtgactag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- IKZF1_HUMAN JUND_HUMAN SRF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.07 | 2.62 | 1.00 | n/a | n/a | |||
| JUND_HUMAN | n/a | 3.42 | 1.50 | 5.77 | Concordant | |||
| SRF_HUMAN | n/a | 2.89 | 1.50 | n/a | No Hit |
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Motif analysis
