rs7301334 chr12:25386382 G>C

Sequence
gtgccacgccttccccacttctgc[G/C]ggcacgcggggccgcgggcgggac
ASB in cell types
22RV1 (prostate carcinoma) breast tumor upper lobe of left lung adult erythroblasts
ASB for transcription factors
ANDR_HUMAN ESR1_HUMAN RBBP5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.48 3.69 0.864.6·10-4 2.00 n/a No Hit
ESR1_HUMAN 0.65 2.31 0.887.4·10-4 2.00 n/a No Hit
RBBP5_HUMAN n/a 2.27 1.000.02 2.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol

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