rs730232 chr2:218034950 T>G
- Sequence
agaaggaagaaaagcaagagcagg[T/G]gctgaaaacgaaaaggaaactagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) Peyer's patch thyroid gland MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN IKZF2_HUMAN ELF1_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.43 | 0.41 | 1.37 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.14 | -1.76 | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.35 | -1.06 | 1.17 | n/a | No Hit | |||
| IKZF1_HUMAN | 2.11 | -2.22 | 1.25 | n/a | n/a | |||
| STAT1_HUMAN | 1.88 | 0.04 | 1.75 | n/a | No Hit |
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