rs7304193 chr12:75938378 C>T
- Sequence
tgcagatgttaatcaggttacaga[C/T]agaagggcagggagttaagggact
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- PBX2_HUMAN PKNX1_HUMAN KDM1A_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PBX2_HUMAN | 3.56 | n/a | 2.00 | -4.63 | Concordant | |||
| PKNX1_HUMAN | 3.10 | n/a | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | 3.41 | -5.32 | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 2.97 | n/a | 2.00 | n/a | No Hit | |||
| SMCE1_HUMAN | 3.23 | n/a | 2.00 | n/a | n/a |
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Motif analysis
