rs7305154 chr12:58804979 A>G
- Sequence
cctgctgcctccaatggatgaatg[A/G]ggtaatgcaagttcttagaaagac
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line) esophagus squamous epithelium GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.82 | 0.54 | 1.37 | n/a | No Hit | |||
| SPI1_HUMAN | 1.52 | 0.45 | 1.00 | -0.61 | Weak Concordant |
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Motif analysis
