rs7308032 chr12:47744239 C>A
- Sequence
tgagctcaggtaaggcacctggga[C/A]caaggatccaggagaagacacaac
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.24 | 0.12 | 1.17 | n/a | No Hit | |||
| STAG1_HUMAN | 1.52 | 0.36 | 1.06 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis