rs7309526 chr12:56683831 T>C
- Sequence
aaattagccgggcgaggtggcggg[T/C]gcctgtagtcccagctactcggga
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) HT1080 (fibrosarcoma)
- ASB for transcription factors
- EP400_HUMAN KDM1A_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP400_HUMAN | 3.06 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.38 | -3.90 | 2.00 | n/a | n/a | |||
| SMCA4_HUMAN | 2.38 | 0.21 | 2.00 | n/a | n/a |
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