rs730979 chr5:181173527 T>G
- Sequence
tccaggtgctgaaacgtgcttttt[T/G]tgtgtgttcatgctcattaacaaa
- ASB in cell types
- K562 (myelogenous leukemia) GM02610 (Lymphoblastoid Cell Lines) GM02255 (Lymphoblastoid Cell Lines) VCaP (prostate carcinoma)
- ASB for transcription factors
- STAG1_HUMAN EGR1_HUMAN CTCF_HUMAN MBL2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.20 | 2.65 | 1.40 | n/a | n/a | |||
| EGR1_HUMAN | n/a | 4.37 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.78 | 1.35 | 1.40 | n/a | No Hit | |||
| MBL2_HUMAN | 1.92 | -0.87 | 2.00 | n/a | n/a |
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