rs7311128 chr12:12904415 C>A
- Sequence
gtggtagcgatggctgtggtgtag[C/A]ttccaggagggtagagtgtttagg
- ASB in cell types
- HT1080 (fibrosarcoma)
- ASB for transcription factors
- GLIS1_HUMAN SSRP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | 3.48 | n/a | 2.00 | 0.44 | Weak Discordant | |||
| SSRP1_HUMAN | 2.41 | -0.01 | 1.00 | n/a | n/a |
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Motif analysis
