rs7311469 chr12:128829978 G>A
- Sequence
tggctgtttcatgacatttctgcc[G/A]tagtttcacatctctgttgagttg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN COT1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.31 | n/a | 2.00 | -0.08 | Weak Concordant | |||
| COT1_HUMAN | 2.62 | -2.29 | 1.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.02 | -0.05 | 1.54 | n/a | No Hit |
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Motif analysis
