rs7313211 chr12:47592036 A>G

Sequence
agttccaatcccatgcctcgagcc[A/G]tatctgtcatcctgtagcctcagc
ASB in cell types
iPSC (induced pluripotent stem cells)
ASB for transcription factors
AP2A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AP2A_HUMAN 2.27 -1.79 0.041.00 1.00 -0.72 Weak Concordant
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Motif analysis

AP2A_HUMAN Weak Concordant
AP2A_HUMAN pic

Genetic associations

GRASP diastolic blood pressure (dbp),  hypertension (early onset hypertension)
GTEx eQTL Adipose_Subcutaneous,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Caudate_basal_ganglia,  Brain_Cerebellum,  Brain_Cortex,  Brain_Hypothalamus,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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