rs7314012 chr12:102951315 C>T
- Sequence
gcgcgctaccagggagactcctta[C/T]ggctcaggagtcccacagggtact
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN IKZF1_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.05 | 1.95 | 1.27 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.85 | -0.76 | 1.25 | n/a | n/a | |||
| IKZF2_HUMAN | 1.78 | -0.99 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Nerve_Tibial, Testis