rs731445 chr17:56228296 T>C
- Sequence
ttctctcaaatgactaatttatta[T/C]tcttttcccagttgctcctcaccg
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- CDK9_HUMAN SPT5H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -0.51 | 1.58 | 1.50 | n/a | n/a | |||
| SPT5H_HUMAN | -0.97 | 1.66 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), hdl cholesterol, neuroblastoma (brain cancer), sporadic creutzfeldt-jakob disease