rs7315230 chr12:125983374 C>A
- Sequence
tcccaaagcagtcgccaggctcca[C/A]gaagcggcgctgatactttggggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- IKZF1_HUMAN SPT5H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -2.13 | 2.27 | 1.00 | n/a | n/a | |||
| SPT5H_HUMAN | 1.31 | -0.24 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cortex, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Esophagus_Mucosa, Liver, Minor_Salivary_Gland, Pancreas, Prostate, Spleen, Testis