rs7318170 chr13:106007465 T>C
- Sequence
tagattctgctgtcatccctgtta[T/C]gtaaataactgagttagaagtatt
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.08 | -0.42 | 1.79 | -3.46 | Concordant |
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Motif analysis
Genetic associations
GRASP autism, late onset alzheimers disease, maternal imprinting effects on cleft palate, serum creatinine