rs7320931 chr13:43307956 T>C
- Sequence
ctgtgggagaggaggcccctccca[T/C]gtacacatgcttaccacaccagtc
- ASB in cell types
- HEK293 (embryonic kidney) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ZFHX2_HUMAN GLIS1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFHX2_HUMAN | n/a | 2.87 | 3.00 | n/a | n/a | |||
| GLIS1_HUMAN | n/a | 2.34 | 2.00 | 3.55 | Concordant | |||
| FOXA1_HUMAN | 2.28 | -4.27 | 2.00 | -1.96 | Weak Concordant |
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Motif analysis
