rs7326480 chr13:20902858 A>G
- Sequence
agggccgtcgcagccgctgtcgac[A/G]ccggcgtcgcggcctcggcgggtc
- ASB in cell types
- HepG2 (hepatoblastoma) 2588 (Lymphoblastoid Cell Lines) 22RV1 (prostate carcinoma) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TYY1_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 0.00 | 2.19 | 1.50 | n/a | No Hit | |||
| STAG1_HUMAN | 0.85 | -0.12 | 1.10 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood