rs7326697 chr13:41962265 T>A

Sequence
agtagttacacaatatattatgac[T/A]tcgtttcatgtgtatcttctcatt
ASB in cell types
MSC (mesenchymal stem cells)
ASB for transcription factors
CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN -0.88 2.75 1.007.0·10-5 1.33 3.90 Concordant
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Motif analysis

CEBPB_HUMAN Concordant
CEBPB_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  biploar disorder (bipolar schizoaffective disorder),  infant head circumference,  mitral annular calcium,  total cholesterol change with statins
GTEx eQTL Thyroid,  Whole_Blood

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